Package: gestate 1.6.0
gestate: Generalised Survival Trial Assessment Tool Environment
Provides tools to assist planning and monitoring of time-to-event trials under complicated censoring assumptions and/or non-proportional hazards. There are three main components: The first is analytic calculation of predicted time-to-event trial properties, providing estimates of expected hazard ratio, event numbers and power under different analysis methods. The second is simulation, allowing stochastic estimation of these same properties. Thirdly, it provides parametric event prediction using blinded trial data, including creation of prediction intervals. Methods are based upon numerical integration and a flexible object-orientated structure for defining event, censoring and recruitment distributions (Curves).
Authors:
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gestate.pdf |gestate.html✨
gestate/json (API)
# Install 'gestate' in R: |
install.packages('gestate', repos = c('https://jamescbell.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:4eda0e9fcc. Checks:OK: 3 NOTE: 4. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 16 2024 |
R-4.5-win | NOTE | Nov 16 2024 |
R-4.5-linux | NOTE | Nov 16 2024 |
R-4.4-win | NOTE | Nov 16 2024 |
R-4.4-mac | NOTE | Nov 16 2024 |
R-4.3-win | OK | Nov 16 2024 |
R-4.3-mac | OK | Nov 16 2024 |
Exports:analyse_simBlankcreate_tte_priorcreateRFfunctionevaluateCDFfunctionevaluateInvfunctionevaluatePDFfunctionevent_predictionevent_prediction_KMevent_prediction_priorExponentialfit_KMfit_tte_datafit_tte_data_priorfrontierpowergetAssessCDFfunctiongetCDFfunctiongetInvfunctiongetLengthgetMaxFgetNgetNactivegetNamesgetNcontrolgetParamgetParamsgetParamsVgetPatientsgetPDFfunctiongetRatiogetRFfunctiongetTypeGGammaGompertzInstantRLinearRLogLogisticLognormalMixExpMixWeinph_trajPieceExponentialPieceRPieceRMaxFplot_epplot_km_fitplot_nphtplotCDFplotRecruitmentplotSFrandom_drawrun_gestateset_assess_timeset_event_numbersetPatientsshowsimulate_trialssimulate_trials_stratasummarise_analysissurvfit_fastWeibull
Dependencies:base64encbslibcachemclicodetoolscommonmarkcrayondigestdoParallelfastmapfontawesomeforeachfsgluehtmltoolshttpuviteratorsjquerylibjsonlitelaterlatticelifecyclemagrittrMatrixmemoisemimepromisesR6rappdirsRcpprlangsassshinyshinythemessourcetoolssurvivalwithrxtable
Event Prediction with the gestate Package
Rendered fromevent_prediction.Rmd
usingknitr::rmarkdown
on Nov 16 2024.Last update: 2023-04-26
Started: 2019-04-26
Planning Time-To-Event Trials with gestate
Rendered fromtrial_planning.Rmd
usingknitr::rmarkdown
on Nov 16 2024.Last update: 2023-04-26
Started: 2019-04-26